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Allow arena_matrix to use move semantics #2928

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Merged
SteveBronder merged 73 commits into from
May 31, 2024
Merged

Allow arena_matrix to use move semantics #2928

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00a9f43
Adds move semantics for arena matrix types
SteveBronder Aug 1, 2023
056e297
use forwarding in sum
SteveBronder Aug 2, 2023
3a6c11e
add docs related to auto dangers with the math library
SteveBronder Aug 2, 2023
fa8a464
add docs related to auto dangers with the math library
SteveBronder Aug 2, 2023
3f07884
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Aug 2, 2023
e5e226b
newline
SteveBronder Aug 2, 2023
d66673b
Merge remote-tracking branch 'refs/remotes/origin/feature/reverse-mod…
SteveBronder Aug 2, 2023
53dc399
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Aug 2, 2023
fcca84d
fix constructor alias bug
SteveBronder Aug 2, 2023
c13855f
Merge remote-tracking branch 'refs/remotes/origin/feature/reverse-mod…
SteveBronder Aug 2, 2023
2f42a0a
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Aug 2, 2023
4189367
fix normal_lpdf templates
SteveBronder Aug 3, 2023
b297df5
Merge remote-tracking branch 'refs/remotes/origin/feature/reverse-mod…
SteveBronder Aug 3, 2023
5b76fc8
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Aug 3, 2023
5fbaf55
fix transpose issues with arena matrix
SteveBronder Aug 4, 2023
1bfd431
Merge remote-tracking branch 'origin/develop' into feature/reverse-mo…
SteveBronder Aug 4, 2023
119099d
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Aug 4, 2023
90b23ab
cleanup after reduce_sum is called in tests
SteveBronder Aug 7, 2023
9ce5c50
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Aug 7, 2023
1871c64
remove tmp sundials files
SteveBronder Aug 7, 2023
42cef50
Merge branch 'feature/reverse-mode-move-semantics' of github.com:stan…
SteveBronder Aug 7, 2023
0ec5253
use agradrev in mix/probs test
SteveBronder Aug 8, 2023
d6b892d
use forwarding in normal_lpdf functions
SteveBronder Aug 17, 2023
984bdf8
Merge commit 'd4eab2773347ca6fbe03d49f70828c08ff248269' into HEAD
yashikno Aug 17, 2023
a85e786
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Aug 17, 2023
1b0504a
fix typo
SteveBronder Aug 17, 2023
4f926cf
Merge remote-tracking branch 'origin/develop' into feature/reverse-mo…
SteveBronder Jan 3, 2024
0d34e03
update docs
SteveBronder Jan 3, 2024
3193ad4
merge from develop
SteveBronder Feb 29, 2024
b37d163
remove double include for hypergeo2f1
SteveBronder Feb 29, 2024
36e0bd3
Merge remote-tracking branch 'origin/develop' into feature/reverse-mo…
SteveBronder Mar 22, 2024
eb6276c
update constructors and assignment operators for arena_matrix
SteveBronder Mar 22, 2024
8acdb6d
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Mar 22, 2024
11da0dd
update get_rows and get_cols for arena_matrix
SteveBronder Mar 22, 2024
8a1f9f0
update docs
SteveBronder Mar 22, 2024
c29860e
update to develop
SteveBronder Apr 2, 2024
0707438
only allow the move operator for arena matrix types if the input type…
SteveBronder Apr 2, 2024
8b96c45
fixes aos csr matrix bug, still debugging soa matrix bug
Apr 12, 2024
0a168c3
Merge remote-tracking branch 'origin/develop' into fix/csr-matrix-tim…
SteveBronder Apr 15, 2024
fec3689
update csr matrix multiply to avoid linker error for windows. Adds to…
SteveBronder Apr 15, 2024
6b8ae15
small fixes
SteveBronder Apr 15, 2024
c83cbfc
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Apr 15, 2024
f594b2c
fix header error
SteveBronder Apr 15, 2024
d1feb19
use static_cast for bool conversion in sparse matrix loops
SteveBronder Apr 15, 2024
33f0825
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Apr 15, 2024
5c5dfc6
update csr_matrix_times_vector w adjoint update. Uncomment tests for …
SteveBronder Apr 18, 2024
b2af1cd
Merge commit '11663a2e79e6dc4286ebf1399573a7048667b1c5' into HEAD
yashikno Apr 18, 2024
b0815c4
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Apr 18, 2024
515d621
Merge remote-tracking branch 'origin/develop' into feature/reverse-mo…
SteveBronder Apr 18, 2024
a604fa4
update header includes for var_test
SteveBronder Apr 18, 2024
6a71cfb
ad require_not_arena_matrix_t
SteveBronder Apr 18, 2024
a2124c1
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Apr 18, 2024
1e906d9
fix definition of require_not_arena_matrix_t
SteveBronder Apr 18, 2024
de7d11e
fix definition of require_not_arena_matrix_t
SteveBronder Apr 18, 2024
d89610e
Merge remote-tracking branch 'origin/feature/reverse-mode-move-semant…
SteveBronder Apr 18, 2024
eee02d8
merge
SteveBronder Apr 18, 2024
c5f983a
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Apr 18, 2024
86a3e83
Merge pull request #3048 from stan-dev/fix/csr-matrix-times-vector
SteveBronder Apr 19, 2024
1f25ef7
Initial updates for winarm64
andrjohns Apr 21, 2024
c9f76db
Fix path error
andrjohns Apr 21, 2024
7a5a009
Update comments
andrjohns Apr 21, 2024
df305d6
Document TBB changes
andrjohns Apr 21, 2024
08d8a22
Merge pull request #3051 from stan-dev/tbb-winarm64
WardBrian Apr 22, 2024
34cf554
use a seperate class for csr_matrix adjoint
SteveBronder Apr 24, 2024
a3a88a5
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Apr 24, 2024
f748825
update docs for new vari for csr_matrix_times_vector
SteveBronder Apr 25, 2024
04124da
[Jenkins] auto-formatting by clang-format version 10.0.0-4ubuntu1
stan-buildbot Apr 25, 2024
9f759e1
Merge pull request #3053 from stan-dev/fix/csr-matrix-seperate-vari
SteveBronder Apr 26, 2024
045073f
Don't set build and clean rules for sundials if external libs used
andrjohns Apr 26, 2024
e73651b
Merge pull request #3054 from stan-dev/sundials-targets
WardBrian Apr 26, 2024
7a9601d
Merge remote-tracking branch 'origin/develop' into feature/reverse-mo…
SteveBronder Apr 26, 2024
d45dff2
update to 5.0
SteveBronder Apr 26, 2024
91ea4c1
fix docs
SteveBronder Apr 29, 2024
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Don't set build and clean rules for sundials if external libs used
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@andrjohns
andrjohns committed Apr 26, 2024
commit 045073fd6435f4e8c2b8c0e7cc0e139fc1cd3993
3 changes: 2 additions & 1 deletion make/libraries
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Original file line number Diff line number Diff line change
Expand Up @@ -23,6 +23,7 @@ CPPLINT ?= $(MATH)lib/cpplint_1.4.5
# Fortran bindings which we do not need for stan-math. Thus these targets
# are ignored here. This convention was introduced with 4.0.
##
ifndef SUNDIALS_TARGETS

SUNDIALS_CVODES := $(patsubst %.c,%.o,\
$(wildcard $(SUNDIALS)/src/cvodes/*.c) \
Expand Down Expand Up @@ -87,7 +88,7 @@ $(STAN_SUNDIALS_HEADERS) : $(SUNDIALS_TARGETS)
clean-sundials:
@echo ' cleaning sundials targets'
$(RM) $(wildcard $(sort $(SUNDIALS_CVODES) $(SUNDIALS_IDAS) $(SUNDIALS_KINSOL) $(SUNDIALS_NVECSERIAL) $(SUNDIALS_TARGETS)))

endif

############################################################
# TBB build rules
Expand Down