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[WIP] Parallel committor with Dask #1001
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dwhswenson
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* switched from dill to cloudpickle due to conflicts (cloudpickle needed for dask) * made netcdfplus objects picklable (for immutable info) ... should check whether this is even necessary * moved setting the delayed interrupt the last moment, but that might be a performance risk for toy models
* GroFileEngine is now storable * snapshot_from_gro is in the `engines.gromacs` namespace
I don't know why this is necessary, but it seems to be. Without this, the process ends before dask starts running tasks.
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This PR will include the first steps toward parallelization using Dask, including a rough implementation of a parallel committor. In principle, this code should be usable, but the long-term goal is to mix this with the hooks that will be part of the 1.5 release, instead of having a separate object for a parallel committor simulation.
This will sit in the
experimentalsubpackage, as I expect that we won't have a final interface that works with Dask until we also have a final implementation of RETIS using Dask.