VIPER is a user-friendly software for assembling and identifying viral genomes (currently SARS-CoV-2, Dengue, and Influenza), from Illumina sequencing data generated through genomic surveillance.
Tool for generating influenza A virus genome sequences from FASTQ data
Genome ANnotator for inFLUenza viruses
A GLUE project for influenzaviruses
Shiny App: Project CovFlu - A Comparative Exploration of Covid-19 and Influenza Demographics in the U.S.
Bioinformatics tool for inFLUenza REassortments Detection, including zoonotic segments.
A tool to fetch Protein sequences of different subtypes of Influenza A virus from the NCBI database and create a local database to store the sequences for further library preparation used for Phage-Immunoprecipitation Sequencing.
GisAids EpiFlu(influenza virus database) Downloader
inFLuenza Amino acid Substitution Caller
Implementación computacional de cebadores y sondas (HA, NP y M1-M2) de Influenza A H1N1 para RT-PCR // Computational implementation of primers and probes (HA, NP, and M1-M2) for Influenza A H1N1 for RT-PCR.
Code repository associated with Brierley et al., 'An AI for AI..'
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