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@Genentech

Genentech

Dedicated to pursuing groundbreaking science to discover and develop medicines

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  1. BRAID BRAID Public

    BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

    217 10

  2. equifold equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 126 20

  3. scimilarity scimilarity Public

    A unifying representation of single cell expression profiles that quantifies similarity between expression states and generalizes to represent new studies without additional training.

    Python 228 19

  4. polygraph polygraph Public

    Polygraph evaluates and compares groups of nucleic acid sequences based on their sequence and functional content for effective design of regulatory elements.

    Jupyter Notebook 38

  5. gReLU gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Python 310 49

  6. gneprop gneprop Public

    GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

    Jupyter Notebook 29 2

Repositories

Showing 10 of 129 repositories
  • jmpost Public
    Genentech/jmpost’s past year of commit activity
    R 17 4 55 (1 issue needs help) 1 Updated Dec 15, 2025
  • SIGnature Public

    SIGnature is a Python package that empowers researchers to rapidly query gene sets across diverse single-cell RNA sequencing (scRNA-seq) datasets through precomputed gene attribution scores.

    Genentech/SIGnature’s past year of commit activity
    Python 22 4 0 0 Updated Dec 12, 2025
  • phase1b Public
    Genentech/phase1b’s past year of commit activity
    R 11 4 15 1 Updated Dec 11, 2025
  • opentreesearch Public

    LLM-Guided Code Evolution

    Genentech/opentreesearch’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Dec 10, 2025
  • decima Public

    Decima is a Python library to train sequence models on single-cell RNA-seq data.

    Genentech/decima’s past year of commit activity
    Python 57 8 1 1 Updated Dec 10, 2025
  • gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Genentech/gReLU’s past year of commit activity
    Python 310 MIT 49 23 5 Updated Dec 8, 2025
  • covtracer Public

    Tools for contextualizing tests, built using covr test traces.

    Genentech/covtracer’s past year of commit activity
    R 23 4 10 0 Updated Dec 8, 2025
  • tangram2 Public
    Genentech/tangram2’s past year of commit activity
    Jupyter Notebook 2 0 0 1 Updated Dec 8, 2025
  • Genentech/2025_heinlein_etal’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Nov 16, 2025
  • CLADD Public

    The official source code for "RAG-Enhanced Collaborative LLM Agents for Drug Discovery"

    Genentech/CLADD’s past year of commit activity
    Python 4 0 0 0 Updated Nov 13, 2025

People

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